PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_15482
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 567aa    MW: 63546.6 Da    PI: 5.0782
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_15482genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.82e-18472562289
                 EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                 +kvl++sdv+++gr+vlpkk ae +  +++ + ++t+ ++d  ++r+W +++++  ++ks++y+l+ ++ +Fv++ngL+egDf+v++  ++ ++
  PEQU_15482 472 QKVLKQSDVGSLGRIVLPKKEAELNlpELDARDGITIEMKDiGTSRVWIMRYRFwpNNKSRMYLLE-NTGDFVRSNGLREGDFIVIY--SDiKS 562
                 79********************999**99999*********7778*******99777777777777.******************99..44344 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.1E-26467566IPR015300DNA-binding pseudobarrel domain
CDDcd100154.19E-30469566No hitNo description
SuperFamilySSF1019362.35E-22469563IPR015300DNA-binding pseudobarrel domain
SMARTSM010198.7E-17471567IPR003340B3 DNA binding domain
PROSITE profilePS5086310.856471567IPR003340B3 DNA binding domain
PfamPF023621.6E-14472562IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
EETAEKLFFS DEDDTFPSLS DFPCMSSPSA SPSVSSATST LPQPVPQLST KSSSANSSET  60
DAMHQPPPLI PAETEIEDRI VPIDAGFDII GDEVDLWGAC TEEPIESSSE PSSSFVSGET  120
LTEEKIGFLC DGDDSSSEDL ACVFLDWLKK NKDSIYSISP EDLRCIKLKR WTIECAARRL  180
GGGKQGRIQL LKLILSWVQI HHLQNKRRRS RGAEATVKDR EFRPPPPPIN ANIPFTHEAT  240
AYNPDIDSHY EVMPCSSWMP FTAESSFPAV MPAGYRGEGL PTYNFYQDQA FLSEPWQKGF  300
SRPVGCCSFR PAPAAQYMPL YYPGMMATAT KEARKRRMAR QKRSFSLHHH RIQQQQNQQQ  360
QSFDAFAAVD EGSDSNNCSF FSSLPADIPS LSPAGEEAAV AAAAPLPEGQ MEEENCLRRH  420
ASSSAGEIRR VSSKLQIFFF FFAIFMNLKL ESAKDDAQEG TKTEKNYRFL LQKVLKQSDV  480
GSLGRIVLPK KEAELNLPEL DARDGITIEM KDIGTSRVWI MRYRFWPNNK SRMYLLENTG  540
DFVRSNGLRE GDFIVIYSDI KSTKYVM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j9b_A3e-354685672101B3 domain-containing transcription factor FUS3
6j9b_D3e-354685672101B3 domain-containing transcription factor FUS3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020576973.10.0regulatory protein viviparous-1-like
TrEMBLA0A2I0VCQ81e-168A0A2I0VCQ8_9ASPA; Regulatory protein viviparous-1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75293443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.12e-54B3 family protein