PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_15704
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 208aa    MW: 22730.2 Da    PI: 8.5118
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_15704genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.0006778100123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  PEQU_15704  78 FTCNYCLRKFFSSQALGGHQNAH 100
                 89*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.63E-675105No hitNo description
PROSITE profilePS5015710.9978105IPR007087Zinc finger, C2H2
PROSITE patternPS00028080100IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MNSPKTNQSS ENNSNVASQI ASSISFQDYS PSNTAHTPLS MRLPLSLSLS INNGSSSSLL  60
SPSSTVESSS DAHQPKVFTC NYCLRKFFSS QALGGHQNAH KRERTIAKRA NAAKQFPHTA  120
LGSVGLQCHG SLHHGFWGRE EVRRSTRFQQ GLFGGVSSFM EEEEVGVHWP GSFRQKVVTG  180
FELVSGSELN YRAKDAGEVD EPDLTLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020582903.11e-153zinc finger protein 4-like
RefseqXP_020582904.11e-153zinc finger protein 4-like
TrEMBLA0A2I0W5721e-73A0A2I0W572_9ASPA; Zinc finger protein 4
STRINGXP_008787905.15e-46(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP98473041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.19e-30zinc finger protein 7