PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16294
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family EIL
Protein Properties Length: 473aa    MW: 53506.4 Da    PI: 5.6889
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16294genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3301.13.5e-92543441286
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.......tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                 e+l++r w dq +++r++e+++q+  + e++       t+ +k n   +q+rrkk sr  D+ +kYMl+    c+aqG+vYgii+e gk+ +g+sd+Lr
  PEQU_16294  54 EDLQRRIWFDQLRIERMREQEQQQQLHVEESanncidpTD-NKLNSKMQQTRRKKLSRVRDSLIKYMLQLTDECKAQGYVYGIISEAGKTITGSSDNLR 151
                 89***************99988765554444478877444.455677889************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT-- CS
        EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg 191
                 aWWk++v+f   +p a+ + + +   ++g+s         + sl++l DT lgSLLsa m hc+ppqrrfplekgv+pPWWPtG e ww+   + k+  
  PEQU_16294 152 AWWKDQVRFSHSAPKALEDFARERCTPGGRSAA------PPGSLKDLSDTMLGSLLSAMMPHCNPPQRRFPLEKGVAPPWWPTGYETWWALNDMTKNVP 244
                 ********************9999998866555......789************************************************777999999 PP

                 .-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXX..... CS
        EIN3 192 tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedve..... 285
                 +ppy+kphdlkkawkv+vL + ikhm+p+++ +r+l+r+sk+lq+kmsa++  ++++ ++ ee+ +++  +    ++ q++++  +++ +e  e     
  PEQU_16294 245 PPPYRKPHDLKKAWKVGVLLSIIKHMAPDLDMVRRLVRKSKCLQEKMSARDLKIWMAAVKDEEEAYRRGNPGVGGVELQAQELGNNNNFDEKAEeimir 343
                 ******************************************************************999998775555666655555555444434443 PP

                 X CS
        EIN3 286 g 286
                  
  PEQU_16294 344 N 344
                 2 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.9E-9554307No hitNo description
Gene3DG3DSA:1.10.3180.103.8E-59186313IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.31E-50188311IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MEGTGSSQFL DSEILPLNTI NSNAQTHPAN LPIPCPTLKI KADSEEYDDG MTIEDLQRRI  60
WFDQLRIERM REQEQQQQLH VEESANNCID PTDNKLNSKM QQTRRKKLSR VRDSLIKYML  120
QLTDECKAQG YVYGIISEAG KTITGSSDNL RAWWKDQVRF SHSAPKALED FARERCTPGG  180
RSAAPPGSLK DLSDTMLGSL LSAMMPHCNP PQRRFPLEKG VAPPWWPTGY ETWWALNDMT  240
KNVPPPPYRK PHDLKKAWKV GVLLSIIKHM APDLDMVRRL VRKSKCLQEK MSARDLKIWM  300
AAVKDEEEAY RRGNPGVGGV ELQAQELGNN NNFDEKAEEI MIRNVESPES TEADFHSTKS  360
AANVLEQTIL PEIEDNGHAW TDVVFNNFHP VAVPVEGNGF LQQNQCHRSF PLQMQGNDSS  420
FDGMNKRRVD QVDLSFGNLS FETVIGGAPS ELGFLFGMEN WQVNQGNGGF LNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-511863153132Protein ETHYLENE INSENSITIVE 3
4zds_B5e-511863153132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574761.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3M02e-92EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
SwissprotQ9SLH01e-92EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A1D8DGS60.0A0A1D8DGS6_PHAAO; Ethylene insensitive 3-like 1
STRINGGSMUA_Achr6P15930_0011e-100(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.13e-90ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]
  11. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]