PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_16990

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

ERF

Protein Properties

Length: 172aa MW: 19092.7 Da PI: 7.3905

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_16990	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	28.8	3e-09	24	68	2	50
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 +kGVr++ + rWv+e+r+p +k++r++lg+ +e+ a aaia r PEQU_16990 24 IFKGVRQRN-SDRWVCEVREP---NKKTRIWLGTIPPHEMRAGAAIALR 68 59**999.7**9998...347*****999999999999865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	6.2E-5	23	53	IPR001471	AP2/ERF domain
CDD	cd00018	7.74E-19	23	79	No hit	No description
SuperFamily	SSF54171	3.01E-10	24	78	IPR016177	DNA-binding domain
Gene3D	G3DSA:3.30.730.10	1.9E-18	24	79	IPR001471	AP2/ERF domain
SMART	SM00380	4.6E-13	24	83	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	12.286	24	77	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MTVSSAPPKR RAGRTKFRET RHPIFKGVRQ RNSDRWVCEV REPNKKTRIW LGTIPPHEMR 60 AGAAIALRGR SACLNFADSP ARLPIPESSS PRDIQRAAVA AAEAFRPGRM EAESSSSAAA 120 EMRVDDPFCM ELGMVDYYLD MAEGMLIDPP PMPSEEEGDG SNCDVSLWSH SF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020589777.1	1e-124	dehydration-responsive element-binding protein 1G-like
Swissprot	A2XWL6	1e-52	DRE1E_ORYSI; Dehydration-responsive element-binding protein 1E
Swissprot	Q8H273	1e-52	DRE1E_ORYSJ; Dehydration-responsive element-binding protein 1E
TrEMBL	A0A455LAF7	2e-83	A0A455LAF7_9ASPA; Dehydration-responsive element-binding DREB-like protein (Fragment)
STRING	XP_008803257.1	1e-67	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP196	36	261

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51990.1	2e-48	C-repeat-binding factor 4

Publications ? help Back to Top
Chen JQ,Meng XP,Zhang Y,Xia M,Wang XP Over-expression of OsDREB genes lead to enhanced drought tolerance in rice. Biotechnol. Lett., 2008. 30(12): p. 2191-8 [PMID:18779926] Li S, et al. Mutation of OsGIGANTEA Leads to Enhanced Tolerance to Polyethylene Glycol-Generated Osmotic Stress in Rice. Front Plant Sci, 2016. 7: p. 465 [PMID:27148296]