PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_17179

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 321aa MW: 35125.4 Da PI: 6.8402

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_17179	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	106.5	1.5e-33	1	48	14	61
zf-Dof 14 tntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk++ PEQU_17179 1 MDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKNKHT 48 69********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-21	1	46	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	24.465	1	47	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	9.4E-26	1	47	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MDTKFCYYNN YNVNQPRHFC KNCQRYWTAG GSMRNVPVGA GRRKNKHTLS GYCHTLITPD 60 SLPSVQTDVP DSIDPKPASP LNCNTTILKF GPDAPLCESI ASMLNLAEQN LELTESRDET 120 SCSSVSKPEE NGFPENSMNS YSNGITPFPH FQYFPGPLLA FPFGPGWNNA PVTGQENGFL 180 TLMPPLLTSP AFCPPLPFPF WSWTGKPWNP PWLISSSSSS SSTITTHCSG NASPTLGKHS 240 REENSEKSLW IPKTLRIDDP VEAAKSSIFA TLGIKPMEAC TFKSFSSKNE NGAEGGSNTS 300 QVLHANPAAM SRSQSFQEIT L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020597715.1	0.0	cyclic dof factor 2-like
TrEMBL	A0A2I0VU28	1e-146	A0A2I0VU28_9ASPA; Cyclic dof factor 2
STRING	XP_008793337.1	1e-110	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1434	38	116

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	2e-55	cycling DOF factor 2