PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17183
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family G2-like
Protein Properties Length: 393aa    MW: 43966 Da    PI: 6.711
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17183genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.85e-334498155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+WtpeLHerFve v+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl
  PEQU_17183 44 KPRLKWTPELHERFVETVNQLGGADKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 98
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.65141101IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.3E-314299IPR009057Homeodomain-like
SuperFamilySSF466891.2E-164399IPR009057Homeodomain-like
TIGRFAMsTIGR015574.1E-224498IPR006447Myb domain, plants
PfamPF002498.1E-94697IPR001005SANT/Myb domain
PfamPF143796.2E-25143189IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MYHLDHNSSN LISLRESYPS ERNLFLQAGN GPVDSGLVLS TDAKPRLKWT PELHERFVET  60
VNQLGGADKA TPKTVMRLMG IPGLTLYHLK SHLQKYRLCK NLQAQTNGRS AKNGGAAEAP  120
DRTAEGSSSL VNNINVGLHN KTVQINEALQ MQMEVQRRLH EQMEVQRHLQ MRIEAQGKYL  180
QTVLEKARTT LEIQNTGSAG HEAAKEQLSE LVSKVSNECF TSAFIGLGEI HGADNLRECR  240
VQHADCSIDS CLTSCEGSQK EQKMHGINLN LQGYHSNLSS GTNEKHENVR FESINSGWWC  300
GELNGHNMFS QPRVNVSENC SLPVSKTNCR QIDKYNSDHE RPNYGGTVQQ ESSKNLNEFG  360
MPCLTPQLDL NTRDDNDAAR NCNEFDLNGF SWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00331DAPTransfer from AT3G04030Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597687.10.0myb-related protein 2-like
SwissprotQ9SQQ91e-106PHL9_ARATH; Myb-related protein 2
TrEMBLA0A2I0VU470.0A0A2I0VU47_9ASPA; Myb family transcription factor APL
STRINGXP_008793331.11e-140(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35743879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.31e-109G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Nakano Y,Naito Y,Nakano T,Ohtsuki N,Suzuki K
    NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis.
    Plant Sci., 2017. 263: p. 219-225
    [PMID:28818378]