PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17487
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 198aa    MW: 21364.2 Da    PI: 10.0426
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17487genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024108130123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ Cg  Fs+   L  H+r+H
  PEQU_17487 108 HQCTRCGAEFSSGQALGGHMRRH 130
                 79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.48E-74265No hitNo description
PROSITE profilePS501579.9514370IPR007087Zinc finger, C2H2
PfamPF139128.2E-74367IPR007087Zinc finger, C2H2
SMARTSM003556.14365IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804565IPR007087Zinc finger, C2H2
SuperFamilySSF576674.48E-7103130No hitNo description
Gene3DG3DSA:3.30.160.606.0E-4106133IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139122.9E-12107133IPR007087Zinc finger, C2H2
SMARTSM003550.037108130IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.907108135IPR007087Zinc finger, C2H2
PROSITE patternPS000280110130IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MLLSRGGHQP EPYTTPALKF TIRRSAELTP PTTTTAKAGS SIHECETCHK CFNSHQALGG  60
HRSSHKKSKL SIPQASAKRS KMAVMNEASI QLSMNSFPSA AVAKVKVHQC TRCGAEFSSG  120
QALGGHMRRH RQEMEKEDGK QNGLALDLNL PPPSEDDGDA EKVSSSHSSA SVRKSPSLSF  180
ATKRPIFMIS SSLVGCQY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581122.11e-145zinc finger protein ZAT5-like
TrEMBLA0A2I0X6X44e-54A0A2I0X6X4_9ASPA; Zinc finger protein ZAT5
STRINGXP_008787454.19e-46(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20133285
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-25C2H2 family protein