PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_17535

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 275aa MW: 30068.8 Da PI: 8.6425

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_17535	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.4	4.9e-31	92	147	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p LH++F++a+eqLGGs+ AtPk+i+e+m v+gLt+++vkSHLQkYRl+ PEQU_17535 92 KQRRCWSPSLHRKFLNALEQLGGSHSATPKQIREIMMVDGLTNDEVKSHLQKYRLH 147 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.159	89	149	IPR017930	Myb domain
SuperFamily	SSF46689	2.29E-17	90	150	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.4E-28	90	150	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.0E-27	92	147	IPR006447	Myb domain, plants
Pfam	PF00249	1.7E-5	94	145	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MFSRELPLCL QLVNEGTDQI TSYQCTLRRP NARRVGKAFQ PFERNKLMPE VLGPAVAADV 60 SSTSGGRRDG GEGVEKEAEE GQSLVPARSN RKQRRCWSPS LHRKFLNALE QLGGSHSATP 120 KQIREIMMVD GLTNDEVKSH LQKYRLHMRR PVVTVRSSNS NSTLNQPQFI LVGGIWVPPQ 180 EFAIKSAAGT TQPADGGSAA LNGLYSPVAS LPVEFGLEEE RPNKKQQTNK LPVMSSNSEQ 240 RCSQDDDSLV DDAATLSNSS STSFVSLNAS VPHPL

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269\|PubMed:27016098}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269\|PubMed:27016098}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020577984.1	0.0	myb family transcription factor EFM-like
Swissprot	Q8VZS3	2e-47	HHO2_ARATH; Transcription factor HHO2
TrEMBL	A0A2I0VQ77	1e-108	A0A2I0VQ77_9ASPA; Two-component response regulator ARR11
STRING	XP_009356299.1	6e-55	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6470	37	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	1e-43	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098] Sun X, et al. The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides. J. Exp. Bot., 2018. 69(7): p. 1749-1764 [PMID:29385617]