PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18013
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 211aa    MW: 23428.3 Da    PI: 10.3978
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18013genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20858155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                sg+ GVr+++ +grWvAeI+d s   +r r +lg+++taeeAa+a+++a+++l+g
  PEQU_18013  8 SGFVGVRRRP-SGRWVAEIKDSS---QRIRLWLGTYDTAEEAARAYDEAARALRG 58
                79********.7*********43...36*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.4E-15858IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-20866IPR016177DNA-binding domain
CDDcd000187.04E-27865No hitNo description
SMARTSM003803.6E-31972IPR001471AP2/ERF domain
PROSITE profilePS5103220.402966IPR001471AP2/ERF domain
PRINTSPR003671.1E-71021IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-271066IPR001471AP2/ERF domain
PRINTSPR003671.1E-73248IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MKKGDSRSGF VGVRRRPSGR WVAEIKDSSQ RIRLWLGTYD TAEEAARAYD EAARALRGDN  60
TRTNFTAAAA AAGGGVGGIG RPHCYQAAGD LSMTAKARLT RRIRSIVERS AAERRTNGWM  120
RVSDQHTMAS IFHPQKMLNE FWAKSVEFGG VGEEEKRWRW ELGFDLDMGE IDGRLEEEDR  180
KRFKVSSSII VPPSFSSLTA TATTAAPEKL S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1410651571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020579097.11e-153dehydration-responsive element-binding protein 2B-like
TrEMBLA0A2I0XCN91e-82A0A2I0XCN9_9ASPA; Ethylene-responsive transcription factor RAP2-11
STRINGXP_008809070.11e-38(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124292634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-16related to AP2 11