PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18261
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bZIP
Protein Properties Length: 352aa    MW: 38202.9 Da    PI: 4.8034
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18261genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.44.7e-16161212354
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                 +lkr rr+ +NRe+ArrsR+RK+a ++ Le  v++L +eN +L k+l   ++
  PEQU_18261 161 DLKRMRRMVSNRESARRSRKRKQAHLADLELQVDQLRGENASLYKQLTDASQ 212
                 79*****************************************976655444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-12158213No hitNo description
SMARTSM003383.5E-15159223IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978161212IPR004827Basic-leucine zipper domain
PfamPF001708.9E-14161209IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-12162213No hitNo description
CDDcd147025.55E-22164214No hitNo description
PROSITE patternPS000360166181IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MKRSASDWDL DEFLPELLRP VELPPSHDDV RRSPSDTPEG LLIRWSTSKI MDGVGDSGGD  60
DGNIADVFGC FSDQDAPSGH SPGGPLTGSQ IWSQNHATLH SSITATIDSQ SSICVGSPTS  120
SLLPKSTENQ TLGGSSGSDQ SDEDSLETEA GAYEHGTNTT DLKRMRRMVS NRESARRSRK  180
RKQAHLADLE LQVDQLRGEN ASLYKQLTDA SQHFTESVTD NRILKSSVDA LRVKMNMAEE  240
LVTRGSLTCS LDHLLQTTIN SSHLPNTRQF SPVIEFPEND GFFVDSSLAA QAQNIDVHVA  300
GAKNGSLRSQ SPPLPSLTTI NNLQSRVNGD ISSCGSDIWP WDSNANVISK QQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175181RRSRKRK
2175182RRSRKRKQ
3177182SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581197.10.0basic leucine zipper 9-like isoform X1
SwissprotQ6H5002e-65RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBLA0A2H3XCD71e-103A0A2H3XCD7_PHODC; bZIP transcription factor RISBZ4 isoform X1
TrEMBLA0A2I0W2831e-104A0A2I0W283_9ASPA; Basic leucine zipper 9
STRINGXP_008781732.11e-104(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20953796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.16e-43basic leucine zipper 9
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]