PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18264
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 114aa    MW: 13259.9 Da    PI: 4.3332
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18264genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.96.2e-092463480
    trihelix 34 vskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80
                +s+++ +  + rs++qCk kwe l  +ykki ++e     +++s ++
  PEQU_18264  2 ISDNCLAMNVVRSSNQCKRKWEMLLADYKKILNWELLS--REESYWS 46
                899*******************************9884..4444565 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MISDNCLAMN VVRSSNQCKR KWEMLLADYK KILNWELLSR EESYWSLPEE RKKDYGLPVS  60
FQKEVFDAMD AVIQVQQQQS DSNNSDPEQI YSVAELERST MNADSGMFSC LFSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581175.12e-70uncharacterized protein LOC110025196
RefseqXP_020581176.12e-70uncharacterized protein LOC110025196
RefseqXP_020581177.12e-70uncharacterized protein LOC110025196
RefseqXP_020581179.12e-70uncharacterized protein LOC110025196
TrEMBLA0A2I0VI722e-52A0A2I0VI72_9ASPA; Uncharacterized protein
STRINGXP_008781712.18e-31(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63532433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.15e-17sequence-specific DNA binding transcription factors