PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_18376

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 258aa MW: 27987.6 Da PI: 9.4176

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_18376	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.4	1.3e-37	19	77	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 kekal+cprC+stntkfCyynnys sqPr+fCk+CrryWt+GG+lrnvP+Ggg+rk+k+ PEQU_18376 19 KEKALNCPRCNSTNTKFCYYNNYSFSQPRFFCKSCRRYWTQGGTLRNVPIGGGSRKKKR 77 57899****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-27	15	77	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-33	21	77	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.509	23	77	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	25	61	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence Send to blast
METAQWHQQG LERKVRPYKE KALNCPRCNS TNTKFCYYNN YSFSQPRFFC KSCRRYWTQG 60 GTLRNVPIGG GSRKKKRFNP SSSLPPPAAT KSAPIVSSTS MNLQPSKLIP HELSSFSLFS 120 SSSSMSATRS GISFEGSSLS KENELSANAR KRLRMLAPSS MSLYCQELHA LGLQKQGGFG 180 MEELMWSGVK LPLQYGVGGM KESKEAGGDG EHALPFEDLN QVTVKGSCDE IVGGVDPSLF 240 WEGVMGNDGG GGGGGGGW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020582215.1	0.0	dof zinc finger protein DOF4.6-like, partial
TrEMBL	A0A2I0WMP9	4e-85	A0A2I0WMP9_9ASPA; Dof zinc finger protein DOF4.6

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	9e-37	Dof family protein