PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_18523

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 353aa MW: 38791.8 Da PI: 9.7024

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_18523	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.1e-10	169	216	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PEQU_18523 169 SHSLAERVRREKISQRMKVLQDLVPGC----NKITGKALMLDEIINYVQSLQ 216 8************************....999***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	5.23E-17	163	234	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.05E-10	163	220	No hit	No description
PROSITE profile	PS50888	15.586	165	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.0E-17	165	233	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.1E-7	169	216	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-9	171	221	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MAAAKAITGE ISGFINNSLS FMPTNCLIPF PTDPGFTERA ARYSSFTSGN YGDAKVGILE 60 AGKLSRVSSC QSLKSKENSS VTDIGSRPGE NNARKRKTVP KSKAKVSEES NLNVKKNRSA 120 ETGDEKVGFE FKEVHNAEEK KGKDNSSELP EPPKGYIHVR ARRGQATDSH SLAERVRREK 180 ISQRMKVLQD LVPGCNKITG KALMLDEIIN YVQSLQRQVE FLSMKLATMN PRLDYNLVNL 240 VAKEPLMSQT NASLPSSVHA FSNLACIFQS KGVTKGMETQ SSLSQLNYNF YQSPYLQPAS 300 IDALGASSSQ LGILWDDDLH SIVQMSPVQN QDSGFTSRNF HGRSATINMK AEL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MAAAKAITGE ISGFINNSLS FMPTNCLIPF PTDPGFTERA ARYSSFTSGN YGDAKVGILE  60
AGKLSRVSSC QSLKSKENSS VTDIGSRPGE NNARKRKTVP KSKAKVSEES NLNVKKNRSA  120
ETGDEKVGFE FKEVHNAEEK KGKDNSSELP EPPKGYIHVR ARRGQATDSH SLAERVRREK  180
ISQRMKVLQD LVPGCNKITG KALMLDEIIN YVQSLQRQVE FLSMKLATMN PRLDYNLVNL  240
VAKEPLMSQT NASLPSSVHA FSNLACIFQS KGVTKGMETQ SSLSQLNYNF YQSPYLQPAS  300
IDALGASSSQ LGILWDDDLH SIVQMSPVQN QDSGFTSRNF HGRSATINMK AEL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020571778.1	0.0	transcription factor bHLH78-like isoform X1
TrEMBL	A0A2I0WY61	0.0	A0A2I0WY61_9ASPA; Transcription factor bHLH62
STRING	XP_008792945.1	3e-90	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP919	38	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	8e-69	bHLH family protein