PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18628
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 252aa    MW: 28301.5 Da    PI: 5.3435
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18628genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.26e-273696259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                dDg++WrKYGqKe+  +++prsYYrCt++   gC++ k+v++s+e+p++++itY g+H+++
  PEQU_18628 36 DDGHSWRKYGQKEILRAKHPRSYYRCTYRktqGCSAMKQVQKSDENPSILDITYLGTHTCS 96
                8***************************98889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-272796IPR003657WRKY domain
SuperFamilySSF1182903.4E-243396IPR003657WRKY domain
SMARTSM007741.9E-373597IPR003657WRKY domain
PfamPF031068.1E-263695IPR003657WRKY domain
PROSITE profilePS5081119.63693IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MIKIKTLVSC RCRKIHANRT SQVRVITEEG AGVPPDDGHS WRKYGQKEIL RAKHPRSYYR  60
CTYRKTQGCS AMKQVQKSDE NPSILDITYL GTHTCSNSPQ QNVQNSRFYN PQQSLLDQQN  120
NVALDLDFQT TNFIVKTESS DMENQDPTTS SSFSSTSTEG MNPEKNLLCS SPRTECGYEG  180
ILSSALMSPT RYGSCGFPWP PCEMNGQADS ILTEAICSAN SVTGSQVMNI EYLLEYGEMD  240
HDEFFDTSVF FV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-203695968OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575407.10.0probable WRKY transcription factor 38
TrEMBLA0A2P1JMN11e-102A0A2P1JMN1_9ASPA; WRKY transcription factor 53-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-31WRKY family protein