PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18797
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GATA
Protein Properties Length: 187aa    MW: 21117.2 Da    PI: 10.8813
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18797genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.62.9e-17118152135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+  Tp+WR gp g+ktLCnaCG+++++ +l
  PEQU_18797 118 CTHCGVRRTPQWRAGPCGPKTLCNACGVRFKSGRL 152
                 *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004011.1E-14112166IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.7E-14114175No hitNo description
PROSITE profilePS5011411.332116148IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.109.2E-14116150IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.83E-11117159No hitNo description
PROSITE patternPS003440118143IPR000679Zinc finger, GATA-type
PfamPF003204.0E-15118152IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MQEENEATNL EWLSRFVHDC NSPESPASPP VTAGPGASTT XXXXXXXXXX XXXXXXXXXP  60
PASNSTVLIP IKSKRSKRRR TKAALWSREP YFDSIPKKQG RKQRNLFAGN HGGGERQCTH  120
CGVRRTPQWR AGPCGPKTLC NACGVRFKSG RLLPEYRPAC SPTFISKVHS NSHREVLEMR  180
RRKYEQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583139.14e-90GATA transcription factor 7-like, partial
TrEMBLA0A2I0VK316e-50A0A2I0VK31_9ASPA; GATA transcription factor 7
STRINGGSMUA_Achr4P24760_0012e-43(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141733108
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.14e-38GATA transcription factor 7