PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19129
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 323aa    MW: 36635.5 Da    PI: 8.8395
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19129genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.22.9e-323490259
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve+s  +++++ei+Y+g+Hnh 
  PEQU_19129 34 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPSKKKVEKSL-EGQITEIIYKGKHNHA 90
                8****************************************.***************7 PP
2WRKY106.11.8e-33187244158
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 ldDgy+WrKYGqK+vkg+++prsYY+Ctsa+Cpv+k+ver+++d ++v++tYeg+Hnh
  PEQU_19129 187 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSARCPVRKHVERASTDLRAVITTYEGKHNH 244
                 59******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-292292IPR003657WRKY domain
SuperFamilySSF1182901.83E-242792IPR003657WRKY domain
PROSITE profilePS5081122.7912892IPR003657WRKY domain
SMARTSM007745.6E-343391IPR003657WRKY domain
PfamPF031068.7E-253489IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.9E-36172247IPR003657WRKY domain
SuperFamilySSF1182908.11E-29179247IPR003657WRKY domain
PROSITE profilePS5081136.954182247IPR003657WRKY domain
SMARTSM007743.5E-37187246IPR003657WRKY domain
PfamPF031061.2E-25188244IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MFPFAPQPSS HEEPEHLNNS IMAAQTLSDQ RGTEDGYNWR KYGQKQVKGS ENPRSYYKCT  60
YPNCPSKKKV EKSLEGQITE IIYKGKHNHA KPMPTRRNTS CFGSEQVHLN SQMLDSTATT  120
ENSSASYGEN DFHMNSMRTK SQGDGFDEDE PDWKKSKNDS ESEEISGNGN IRTPKVVIQT  180
TSDMDVLDDG YRWRKYGQKV VKGNPNPRSY YKCTSARCPV RKHVERASTD LRAVITTYEG  240
KHNHGVPPPR GNGSMISKPM LNNNFYDFNN FTMPTRPMAM PTHISQVAND SLFGSRQNFG  300
LDSFGFSRFD NVMGGFYGNQ QQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-3523247777Probable WRKY transcription factor 4
2lex_A4e-3523247777Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583191.10.0WRKY transcription factor WRKY24-like
SwissprotQ6IEQ71e-104WRK24_ORYSJ; WRKY transcription factor WRKY24
TrEMBLA0A2I0VFK50.0A0A2I0VFK5_9ASPA; Putative WRKY transcription factor 33
STRINGXP_008804160.11e-123(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29923687
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.12e-89WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Zhang ZL, et al.
    A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
    Plant Mol. Biol., 2009. 70(1-2): p. 139-51
    [PMID:19199048]
  3. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]
  4. Zhang L, et al.
    Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
    Plant Sci., 2015. 236: p. 214-22
    [PMID:26025535]