PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19165
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 252aa    MW: 28025.8 Da    PI: 9.6676
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19165genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-1064110354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r+h+ +E+rRR+riN  +++Lr + P++      K++Ka+ L +++e +++L
  PEQU_19165  64 RTHSLAEKRRRERINAHLATLRHMTPNS-----SKMDKASLLARVIEQVRDL 110
                 68*************************8.....7************988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.26261110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-1264113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-864110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-1264116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.83E-964112No hitNo description
SMARTSM003536.5E-1067116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.1E-4152201No hitNo description
CDDcd048731.07E-6157221No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MKKSYNFSEE SKRADQSSSP YNGALLLPMA SSISAPALLS QNRDFPPSSS SSFSTDARTV  60
AALRTHSLAE KRRRERINAH LATLRHMTPN SSKMDKASLL ARVIEQVRDL NRNAANINKI  120
SAIPSEMNRV TVECISGGLI RSPFSSCADE NRHIKATLCC NDRPDLFSDL MRAFHILRLT  180
AIRAELTSVG GRAQNVFTLC RNDGSENVCM SSLMESIRNV LNEIASSEDS AFVDRSEKRQ  240
RFLATNYFNM TV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583199.10.0transcription factor bHLH30-like
TrEMBLA0A2I0WVD71e-127A0A2I0WVD7_9ASPA; Transcription factor bHLH51
STRINGXP_008805006.16e-66(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33473678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.13e-33bHLH family protein