PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19306
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 230aa    MW: 24779.5 Da    PI: 9.0534
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19306genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.6e-144692354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++h+e+ErrRR+riN  +++Lr++ P a      Kl+Ka  L +++++Ik+L
  PEQU_19306 46 KSHSEAERRRRERINGHLSTLRRMTPCA-----DKLDKAGLLAEVINHIKNL 92
                58*************************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.5294392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-114692IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-134794IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-124794IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-114998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.58E-45693No hitNo description
Gene3DG3DSA:3.30.70.2601.9E-4131178No hitNo description
CDDcd048731.56E-5131199No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MFRVGTSSVA ALILDGESGE LVQAPVKLGK RGGGGVADAR SAMALKSHSE AERRRRERIN  60
GHLSTLRRMT PCADKLDKAG LLAEVINHIK NLKSDAVEIG KFCTIPSDTD ELKVEVDGVG  120
ASNNSLSIKA SFCCDDRLGL LADLKHTLES LQLKTISAEI SSLGGRVKFV FVMTGEGLNN  180
DLERHLLITT IHQALKSVLY RASSMDLLPN ACFPGKKRRI SLFESSSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15156ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020595899.11e-165transcription factor bHLH30-like
TrEMBLA0A2I0VXH81e-129A0A2I0VXH8_9ASPA; Transcription factor bHLH107
STRINGXP_008783898.11e-91(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP110112938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.15e-35bHLH family protein