PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19348
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 269aa    MW: 30268.2 Da    PI: 8.0553
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19348genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.97.1e-18114168256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ ++tkeq   Le+ F+++++++ ++++ LAk+l+L  rq+ vWFqNrRa+ k
  PEQU_19348 114 RKKLRLTKEQSALLEDRFKEHSTLNPKQKQTLAKQLNLRARQIEVWFQNRRARTK 168
                 788899***********************************************98 PP
2HD-ZIP_I/II119.51.8e-38114202190
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                  +kk+rl+keq++lLE+ F+e+++L+p++K++la++L+l++rq++vWFqnrRARtk+kq+E+d+e+L+r++++l+een+rL ke +eL+ +
   PEQU_19348 114 RKKLRLTKEQSALLEDRFKEHSTLNPKQKQTLAKQLNLRARQIEVWFQNRRARTKLKQTEVDCEFLRRCCETLTEENRRLLKELQELK-A 202
                  69*************************************************************************************9.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007117.265110170IPR001356Homeobox domain
SMARTSM003891.1E-14112174IPR001356Homeobox domain
SuperFamilySSF466891.11E-17113179IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-16114168IPR009057Homeodomain-like
PfamPF000462.8E-15114168IPR001356Homeobox domain
CDDcd000862.20E-14115171No hitNo description
PROSITE patternPS000270145168IPR017970Homeobox, conserved site
PfamPF021837.4E-11170203IPR003106Leucine zipper, homeobox-associated
SMARTSM003403.9E-21170216IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MERGDSCDTD LSLGLGLPTI IRQQQLNPPP PPLEPSLTLS LSEEIYGSTT TPKEARLSSP  60
HSTISSFSTS NIKKEKLDVG GEETEVERGS SSRARERERE REREEEDEAS AAARKKLRLT  120
KEQSALLEDR FKEHSTLNPK QKQTLAKQLN LRARQIEVWF QNRRARTKLK QTEVDCEFLR  180
RCCETLTEEN RRLLKELQEL KAIKFSTPPP PLFMQLPAAT LMVCPSCERV TGAGVGVANK  240
AADGNDISRG TFMTSQQHLF NPFAHSTTC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192102RARERERERER
2162170RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00477DAPTransfer from AT4G37790Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572230.10.0homeobox-leucine zipper protein HOX19-like
SwissprotA2XE761e-80HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotQ8GRL41e-80HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A2I0WRV51e-146A0A2I0WRV5_9ASPA; Homeobox-leucine zipper protein HOX19
STRINGGSMUA_Achr8P26480_0014e-87(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20553698
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.13e-63HD-ZIP family protein