PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19415
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Nin-like
Protein Properties Length: 63aa    MW: 7399.99 Da    PI: 11.6964
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19415genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK65.39.5e-211371652
      RWP-RK 16 lpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                +pi++AAk+L+v++T+LK++CR+++I+RWP+Rki+s+
  PEQU_19415  1 MPINKAAKKLNVGVTLLKKRCREMNIRRWPYRKIRSV 37
                79*********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151914.015158IPR003035RWP-RK domain
PfamPF020423.8E-18137IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    Send to blast
MPINKAAKKL NVGVTLLKKR CREMNIRRWP YRKIRSVETL IQNIKVLHPF PILFHSNSCL  60
LAT
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019199919.13e-18PREDICTED: protein RKD1-like
SwissprotQ9CA666e-16RKD2_ARATH; Protein RKD2
TrEMBLA0A2I0WDX65e-17A0A2I0WDX6_9ASPA; Protein RKD3
STRINGXP_006477595.11e-16(Citrus sinensis)
STRINGXP_009778708.12e-16(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45903365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.12e-18RWP-RK domain-containing protein
Publications ? help Back to Top
  1. Tedeschi F,Rizzo P,Rutten T,Altschmied L,Bäumlein H
    RWP-RK domain-containing transcription factors control cell differentiation during female gametophyte development in Arabidopsis.
    New Phytol., 2017. 213(4): p. 1909-1924
    [PMID:27870062]