PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_19571

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bZIP

Protein Properties

Length: 171aa MW: 19458.4 Da PI: 10.022

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_19571	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.8	1.5e-10	5	46	5	43
CHHHCHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLe...ekvkeLeaeNk 43 + rr+++NReAAr+sR+RKka+i++Le k ++Le+e + PEQU_19571 5 QLIRRLAQNREAARKSRLRKKAYIQQLElsrIKLAQLEQEVD 46 5689***********************854457777777755 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.5E-5	1	68	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.6E-7	5	44	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.6E-10	7	51	No hit	No description
SuperFamily	SSF57959	3.81E-8	7	50	No hit	No description
PROSITE pattern	PS00036	0	8	23	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.0E-29	91	166	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence Send to blast
MLHVQLIRRL AQNREAARKS RLRKKAYIQQ LELSRIKLAQ LEQEVDKVRN QGVYIGEHVG 60 NSTAGYSGSV NSGIAAFELE YGHWIEELSR QICELRAALQ GSASEIELGI LVENGMRHYE 120 NLFRMKSIAA KSDVFYIVSG LWKASAERFF LWIGGFRPSA LLKVLERAHN L

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020588413.1	1e-111	transcription factor TGA4-like isoform X1
Refseq	XP_020588414.1	1e-111	transcription factor TGA4-like isoform X1
Refseq	XP_020588415.1	1e-111	transcription factor TGA4-like isoform X1
Refseq	XP_020588416.1	1e-111	transcription factor TGA4-like isoform X1
Refseq	XP_020588417.1	1e-111	transcription factor TGA4-like isoform X1
Refseq	XP_020588418.1	1e-111	transcription factor TGA4-like isoform X1
Swissprot	Q39237	7e-78	TGA1_ARATH; Transcription factor TGA1
TrEMBL	A0A2I0WZS6	3e-98	A0A2I0WZS6_9ASPA; Transcription factor TGA1
STRING	XP_008804505.1	2e-81	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.6	6e-81	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Herrera-Vásquez A, et al. Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Sun T, et al. TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g). New Phytol., 2018. 217(1): p. 344-354 [PMID:28898429]