PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19794
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 183aa    MW: 21202.2 Da    PI: 9.9958
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19794genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.51.6e-2129115390
        FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 Y+ YA+++GF+vrk++s    ++++i++++fvC k g+++e +++  + r +ra+trt+C a+++   + +g+w v+k+ + HnH+la
  PEQU_19794  29 YCVYAHHIGFTVRKEHSGFWPNSKKIKSKDFVCGKTGFKKELNDT-ITVRFKRANTRTDCPAMIRYFVDLEGNWSVKKFIKSHNHPLA 115
                 99**************************************99888.99999***********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-1929115IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MHRSSSKSPE AEKLLHAVVH NEKEAYEQYC VYAHHIGFTV RKEHSGFWPN SKKIKSKDFV  60
CGKTGFKKEL NDTITVRFKR ANTRTDCPAM IRYFVDLEGN WSVKKFIKSH NHPLAKDGDK  120
HLLCSNRKMC DISDDILRSM TKSGIRTSDA FKFLATEVGG VENLDCTKRD AYNFKQRERR  180
VQI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573853.11e-113protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020581377.11e-113protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VPA51e-57A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A2I0VS863e-58A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-14FAR1-related sequence 5