PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19869
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 197aa    MW: 21137 Da    PI: 8.6388
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19869genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH444.1e-142269254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +r+h+e+Er+RR+riN  +++Lr+llP+a      +++Ka+ L ++v+++++L
  PEQU_19869 22 CRSHSEAERKRRQRINGHLATLRSLLPSA-----ARMDKATLLGEVVRHVREL 69
                789*************************8.....7***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.7262069IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-112269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.63E-122370No hitNo description
Gene3DG3DSA:4.10.280.101.5E-132370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-132476IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-122675IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.612103182IPR002912ACT domain
SuperFamilySSF550215.19E-5105171No hitNo description
Gene3DG3DSA:3.30.70.2604.3E-5106156No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
METDGAAVLP ITASCSPAAR SCRSHSEAER KRRQRINGHL ATLRSLLPSA ARMDKATLLG  60
EVVRHVRELR GIADEVASSS VPCEGDEVGV EDEMVEGGCG RVRAWVCCAD RPGLMGELSQ  120
AVVAARARAV RAEMTTVGGR TRSVLELELV GGSAAIDGEA RSAIRAALRE VLLDDRNRSV  180
DRFKRQRTSN RFGTAAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12833ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585133.11e-136transcription factor bHLH30-like
TrEMBLA0A2I0VR531e-110A0A2I0VR53_9ASPA; Transcription factor bHLH107
STRINGXP_008775224.17e-65(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41143569
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.12e-20bHLH family protein