PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20067
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family AP2
Protein Properties Length: 248aa    MW: 26841.2 Da    PI: 7.7587
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20067genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.32.2e-142575155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k++g
  PEQU_20067 25 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKFNG 75
                89********.7******5553..2.26**********99***********9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.56E-182585IPR016177DNA-binding domain
CDDcd000182.85E-272585No hitNo description
PfamPF008471.2E-92575IPR001471AP2/ERF domain
SMARTSM003808.3E-322689IPR001471AP2/ERF domain
PROSITE profilePS5103216.452683IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-172684IPR001471AP2/ERF domain
PRINTSPR003676.0E-72738IPR001471AP2/ERF domain
PRINTSPR003676.0E-76585IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MSNLTKEEFV HVLRRQSTGF PRGSSKYRGV TLHKCGRWEA RMGQFLGKKY VYLGLFDTEV  60
EAARAYDKAA IKFNGKDAVT NFDASIYADE LGCSPVQIEH NLDLSLGSSA SKISAMSPMD  120
EESSGCGSSG GGGGGGADQR FLTTCHEAIN ATTKLKLPDH ESRVNFHLGH HMEMLKHSSY  180
IQQQSPLPQP QPVGFPFIRH HLSHPSIYHQ YLGGNMAAAA RNGGDVHLSL GIDGGSSWAP  240
LHAAPPPP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020576148.10.0AP2-like ethylene-responsive transcription factor TOE3
TrEMBLA0A2K9Y5191e-151A0A2K9Y519_9ASPA; AP2-3
STRINGXP_008795894.15e-65(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55143658
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.21e-61AP2 family protein