PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20462
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 260aa    MW: 30394 Da    PI: 8.197
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20462genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.12.8e-13188254269
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69 
                  Y++YA+ +GFsvrk++ +   ++++i++++fvC k g+++e k + ++ + +ra+t tgC a+++  
  PEQU_20462 188 VYCAYAHYIGFSVRKEHATFWPNSRNIKTKDFVCGKTGFKKELKIT-KTVKYRRAKTITGCPAMIQYG 254
                 7*****************************************9988.8889999**********9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.8E-11188255IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MLWRSELMTL LLSPSMIIPR VSLIHGSKPS LRAIVAFTST CELFQCCIFL HKAFKRVPYR  60
PEEQPPCVHP TEKKHAVHVC FDPNWWGGCS KEKKNTTYQT EWYPIAPGWV EQSGSFQQLD  120
LLNLKMNYEY RDFQFMYDAE VEDESYPVRK EEVKLKFEFC ESKTSCTEQT TNILLQTMVH  180
IEKEAYEVYC AYAHYIGFSV RKEHATFWPN SRNIKTKDFV CGKTGFKKEL KITKTVKYRR  240
AKTITGCPAM IQYGVDDEGN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592536.12e-66protein FAR1-RELATED SEQUENCE 5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587