PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_20819
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 175aa    MW: 18341.1 Da    PI: 9.1191
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_20819genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003488110123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C +Cg  Fs+   L  H+r+H
  PEQU_20819  88 HDCAICGSEFSSGQALGGHMRRH 110
                 56********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.54E-73355No hitNo description
SMARTSM003559.13355IPR015880Zinc finger, C2H2-like
PfamPF139123.0E-73357IPR007087Zinc finger, C2H2
PROSITE patternPS0002803555IPR007087Zinc finger, C2H2
SuperFamilySSF576673.54E-783110No hitNo description
PfamPF139126.1E-1087112IPR007087Zinc finger, C2H2
SMARTSM003550.4388110IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.32888110IPR007087Zinc finger, C2H2
PROSITE patternPS00028090110IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MAKCLILLAQ GTTFPVNQAA TTPSPPTAPI ASHHCITCNR YFLSFQALGG HRASHKKPKI  60
SALDAELASS LAKPAASSSS GGVKQKTHDC AICGSEFSSG QALGGHMRRH RPAIILQKNS  120
EIDKKKNRVL LLDLNLPAPE EEEPFVPGNP VVFSPSAAAS AAAAATVALV VHCHY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581047.11e-126zinc finger protein ZAT5-like
TrEMBLA0A2I0VX032e-48A0A2I0VX03_9ASPA; Zinc finger protein ZAT5
STRINGXP_008807698.11e-37(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20133285
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.16e-30C2H2 family protein