PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_21081

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 143aa MW: 16416.9 Da PI: 8.4479

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_21081	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.7	7.4e-08	73	125	3	55
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtr 55 Y++YA +v F++rk+++++ ++++ + +++ C k g+++e +++ +++++tr PEQU_21081 73 YRAYADHVRFTIRKDHTTYWPNSKKLKIKDYICGKAGYKKEPNNTVSSKKQTR 125 9****************************************999966666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence Send to blast
MEFSMNVEVS EVSIKVEMPS FSLLPSFSLN FEDQACGFLV LLLCYSGVTL NDPIAEKFLS 60 SIIHNEEEAY ENYRAYADHV RFTIRKDHTT YWPNSKKLKI KDYICGKAGY KKEPNNTVSS 120 KKQTRGLAVR PWFNFMLISK AIG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020574582.1	1e-47	protein FAR1-RELATED SEQUENCE 5-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87