PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21815
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 157aa    MW: 17863.3 Da    PI: 9.6025
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21815genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.4e-181771256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                rk+ +++keq   Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  PEQU_21815 17 RKKLRLSKEQSAFLEENFKEHSTLKPKQKSALAKQLNLRPRQVEVWFQNRRARTK 71
                788899***********************************************98 PP
2HD-ZIP_I/II125.23e-4017107192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  +kk+rlskeq+++LEe+F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+++r+++al+een+rL+ke +eLr +lk
   PEQU_21815  17 RKKLRLSKEQSAFLEENFKEHSTLKPKQKSALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYMRRCCEALAEENRRLQKELSELR-ALK 107
                  69*************************************************************************************9.555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.8111373IPR001356Homeobox domain
SuperFamilySSF466893.34E-181582IPR009057Homeodomain-like
SMARTSM003896.3E-141577IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.9E-171771IPR009057Homeodomain-like
CDDcd000865.53E-131774No hitNo description
PfamPF000469.2E-161771IPR001356Homeobox domain
PROSITE patternPS0002704871IPR017970Homeobox, conserved site
PfamPF021838.7E-1173107IPR003106Leucine zipper, homeobox-associated
SMARTSM003403.5E-2173116IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MAESSRFSDD EENGGARKKL RLSKEQSAFL EENFKEHSTL KPKQKSALAK QLNLRPRQVE  60
VWFQNRRART KLKQTEVDCE YMRRCCEALA EENRRLQKEL SELRALKSTH HFYTQLPATT  120
LSMCAACEAG GAAAGEPTVQ ASRVPSPASL PRFTYMP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16573RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577231.11e-111homeobox-leucine zipper protein HOX11-like
SwissprotA2Z1U19e-70HOX11_ORYSI; Homeobox-leucine zipper protein HOX11
SwissprotQ67UE23e-69HOX11_ORYSJ; Homeobox-leucine zipper protein HOX11
TrEMBLA0A3L6T7D32e-69A0A3L6T7D3_PANMI; Uncharacterized protein
STRINGXP_010557949.11e-69(Tarenaya hassleriana)
STRINGXP_008789293.14e-69(Phoenix dactylifera)
STRINGXP_008791862.14e-69(Phoenix dactylifera)
STRINGXP_010265939.13e-69(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20553698
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.15e-65homeobox from Arabidopsis thaliana