PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_21851

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 244aa MW: 27649.8 Da PI: 6.1606

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_21851	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.5	8.6e-07	2	40	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 RRdr+N+ f eL ++ ++ +K++Ka+iL A+ +k+L PEQU_21851 2 RRDRLNEQFLELGNVIDPD----RPKNDKATILGDAILMLKDL 40 **************997....79**********999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.702	1	40	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.31E-5	2	45	No hit	No description
SuperFamily	SSF47459	2.88E-10	2	60	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.1E-11	2	63	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence Send to blast
MRRDRLNEQF LELGNVIDPD RPKNDKATIL GDAILMLKDL TAQVHRLKAE HTLLSEESRE 60 LTQEKNELRE EKSALKSEID NLNTQYQQRL GCLYPWATVD PSVIIRSPSP YSFPISVPIP 120 SGPVPFHTSI PLYPFFQNQS PAAVPSHCSS YHPFASSSNP YVEQQPTQQL PPHPHRCNDD 180 DRSTTRNESR SWSSERLRCG VSERSSDFSD VVTELELKIP GSANRSDSKS AIIQQVFYYS 240 CSGF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020591413.1	1e-173	transcription factor bHLH121-like
TrEMBL	A0A2I0VIK6	1e-126	A0A2I0VIK6_9ASPA; Transcription factor bHLH121
STRING	XP_008788362.1	4e-91	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11767	25	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	1e-58	bHLH family protein