PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21853
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 390aa    MW: 45382.6 Da    PI: 8.2488
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21853genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1354.5e-111983368
        FAR1  3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68
                Y++YA+++GF vrk++     +++ i++++f C k  ++++ +++ +  + +r  trtgC a+++ 
  PEQU_21853 19 YCAYAHHIGFAVRKDHVGFWPNSKMIKTKDFICGKANFKKKLNNN-VAVKYKRGDTRTGCPAMIRY 83
                99***************************************9999.99999************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.3E-91983IPR004330FAR1 DNA binding domain
SMARTSM005750.0021186213IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
ADSLLRAVVH NEKEAYENYC AYAHHIGFAV RKDHVGFWPN SKMIKTKDFI CGKANFKKKL  60
NNNVAVKYKR GDTRTGCPAM IRYVVDVEVS TEFGGVENLD CTKRDAYNFI QIERKSIIEN  120
GDANSLLRLF TERQAEDTMF AWDVQIDESG SLLNFFWSDG ISRLDYDCFG NVIIFDTSYR  180
LKKYNLCCAP RKFEMIGILC AHTLRVLNHE NITKISDKYI LLRWSVHAKR DIYNNYGYKH  240
LKDSQTSATC SSGLIXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  360
XXXXXXXXXX XXXXXXXXXX XXXXCDLIPN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-14FAR1-related sequence 7