PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21854
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 238aa    MW: 27389 Da    PI: 7.8443
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21854genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000416687323
                ETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
                C +C+++++++ +L  H +  H
  PEQU_21854 66 CAICSRVYPTSRLLSIHVSEvH 87
                *****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM00355133762IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803962IPR007087Zinc finger, C2H2
SMARTSM003559.66487IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806687IPR007087Zinc finger, C2H2
SMARTSM003550.58102127IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280104127IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MELSELGFPY WRAVALDLTE DEMYQIQKIE DSGSSFVHCP IVSCGARLSC LEDFEDHYHA  60
RHMSACAICS RVYPTSRLLS IHVSEVHDSF FAAKVARGFP MYECLVEGCG AKLKSYKSRK  120
QHLIHKHKFP SSFEFKKAKP SKHRREINQH KQHDQTKEEA MEGGASFLVQ QNEDEKVSHY  180
ERMEVEEMDE LVSAVSKLRT SDCSTPSSVS FGRRHNRAFT FLPRSLRQNI KHRSGAME
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020591409.11e-170LOW QUALITY PROTEIN: zinc finger protein 511
TrEMBLA0A2I0VII91e-117A0A2I0VII9_9ASPA; Uncharacterized protein
STRINGXP_008807434.12e-91(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109112629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.19e-79zinc ion binding;nucleic acid binding;zinc ion binding