PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_22493
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 160aa    MW: 18459.8 Da    PI: 9.1613
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_22493genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.41.8e-161591290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 Y++YA+ vGF+vrk++ ++  ++++i+++++ C k+gk +++             trtgC+a +    + dg+w + k+++ HnH+la
  PEQU_22493 15 HYCAYAHYVGFTVRKDHITNWAKSKQIKSKDYICEKSGKYRKT------------DTRTGCQAIVCYAIDLDGNWTIRKFVESHNHPLA 91
                6*************************************98774............478***********99****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.5E-141591IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
FLNTVVRNEE EAYKHYCAYA HYVGFTVRKD HITNWAKSKQ IKSKDYICEK SGKYRKTDTR  60
TGCQAIVCYA IDLDGNWTIR KFVESHNHPL AESGDKHLLR SSWKISELNA NLLRSMTGSG  120
IRAADAFNFL ATEVGGVENL ECTRQDSYNF IQRNKRSRIE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584372.17e-98putative protein FAR1-RELATED SEQUENCE 10
TrEMBLA0A2I0VS862e-49A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-17FAR1-related sequence 5