PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_22804
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 105aa    MW: 12202 Da    PI: 9.8092
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_22804genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.62.4e-191097290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 Y++YA+++GFsv+k++ +   ++++ +++ fvC + g+++e k + +  + +ra trtgC  +++   + +g+  v+k+ + HnH+la
  PEQU_22804 10 VYCAYAHHIGFSVCKEHDTFWLNSKNLKTKYFVCRRAGFKKELKAT-QIVKYKRADTRTGCPVMIRYAVDAEGNRTVKKFIESHNHSLA 97
                7********************9********************9988.88899***********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-161097IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
VHNEKEAYEV YCAYAHHIGF SVCKEHDTFW LNSKNLKTKY FVCRRAGFKK ELKATQIVKY  60
KRADTRTGCP VMIRYAVDAE GNRTVKKFIE SHNHSLANPG DKHLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020598366.15e-64putative protein FAR1-RELATED SEQUENCE 10
TrEMBLA0A2I0VPA56e-33A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A2I0VS863e-34A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-10FAR1 family protein