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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PEQU_23109 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 160aa MW: 17983.3 Da PI: 8.6857 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 39.1 | 1.6e-12 | 30 | 89 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
k+ +r+ +NRe+ArrsR+RK +++ L +++ +L ++N + ++ + ++ l+se+
PEQU_23109 30 QKKRKRMLSNRESARRSRLRKDNYLKDLMTEISQLREKNGLIRTSVNLYAQNNLVLESEN 89
6999***********************************999999999999998888887 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 1.1E-13 | 27 | 91 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 10.013 | 29 | 92 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 2.3E-10 | 30 | 105 | No hit | No description |
| SuperFamily | SSF57959 | 1.76E-10 | 31 | 86 | No hit | No description |
| Pfam | PF00170 | 5.1E-10 | 31 | 89 | IPR004827 | Basic-leucine zipper domain |
| CDD | cd14702 | 1.40E-14 | 32 | 80 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 34 | 49 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 160 aa Download sequence Send to blast |
MASSSGGSSG SSSLLTNSGM GTDLQAVMDQ KKRKRMLSNR ESARRSRLRK DNYLKDLMTE 60 ISQLREKNGL IRTSVNLYAQ NNLVLESENS VLRTQVIELT SWLNSLNDIL QYLNLNNSCV 120 NPQIMASGCF TNPWISAYEP AYNGFTKFAP VLDQDDFFLL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 43 | 49 | RRSRLRK |
| 2 | 43 | 50 | RRSRLRKD |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020593300.1 | 7e-78 | bZIP transcription factor 11-like | ||||
| TrEMBL | A0A2I0VP52 | 1e-51 | A0A2I0VP52_9ASPA; Ocs element-binding factor 1 | ||||
| STRING | XP_007135953.1 | 3e-37 | (Phaseolus vulgaris) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP4459 | 33 | 67 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G34590.1 | 7e-28 | G-box binding factor 6 | ||||




