PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23271
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Dof
Protein Properties Length: 257aa    MW: 28174 Da    PI: 8.9641
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23271genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.73e-391373262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ke++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss
  PEQU_23271 13 KEQSLHCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSS 73
                57899*****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-28671IPR003851Zinc finger, Dof-type
PfamPF027011.5E-331571IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.1241771IPR003851Zinc finger, Dof-type
PROSITE patternPS0136101955IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009639Biological Processresponse to red or far red light
GO:0009845Biological Processseed germination
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
PQVQAEKRVR PYKEQSLHCP RCNSTNTKFC YYNNYSLTQP RYFCKTCRRY WTEGGSLRNV  60
PVGGGSRKNK RSSTSSLANS SSLTSTTTTT SLVYSSSTNP QPADEHIPTV QIPLANSKLF  120
QVSGQDLNLS FPNQTMAHHD QFGSISALEL LRSGISARGF TSFTAAQGSS FEARFGFQEL  180
MRQSNMKLPF DHHGGFSGSM HQTQESGSGR ALFPFEDLKQ VHAGNGGHEG EENGVVQPET  240
ESGLFWNGGN GRGGGTW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573169.10.0dof zinc finger protein DOF3.7-like
TrEMBLA0A2I0VKE81e-136A0A2I0VKE8_9ASPA; Dof zinc finger protein DOF3.7
STRINGXP_008790518.11e-59(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23693486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.33e-49Dof family protein