PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23281
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 349aa    MW: 39308.4 Da    PI: 9.1019
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23281genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.000551032123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C k Fs+  +L  H+r H
  PEQU_23281 10 HRCKICRKIFSSGRSLGGHMRFH 32
                79*******************98 PP
2zf-C2H215.35.8e-0585104221
                 EETTTTEEESSHHHHHHHHH CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                 +C  Cgk F+++ +L  H+r
  PEQU_23281  85 RCRECGKEFPSWKSLFGHMR 104
                 7******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.7431035IPR007087Zinc finger, C2H2
SuperFamilySSF576671.52E-71032No hitNo description
PfamPF139121.8E-51032IPR007087Zinc finger, C2H2
SMARTSM003550.0821032IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801234IPR007087Zinc finger, C2H2
SuperFamilySSF576671.52E-779106No hitNo description
PROSITE profilePS5015710.92884111IPR007087Zinc finger, C2H2
SMARTSM003550.005184106IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.608.1E-485108IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139122.4E-785108IPR007087Zinc finger, C2H2
PROSITE patternPS00028086106IPR007087Zinc finger, C2H2
SuperFamilySSF576671.56E-7225248No hitNo description
PfamPF139122.1E-9225250IPR007087Zinc finger, C2H2
PROSITE profilePS501579.577226253IPR007087Zinc finger, C2H2
SMARTSM003550.36226248IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280228248IPR007087Zinc finger, C2H2
SuperFamilySSF576671.56E-7275302No hitNo description
Gene3DG3DSA:3.30.160.604.9E-4278302IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.429280302IPR007087Zinc finger, C2H2
PfamPF139122.0E-10280302IPR007087Zinc finger, C2H2
SMARTSM003550.089280302IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280282302IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MESYQKQTKH RCKICRKIFS SGRSLGGHMR FHIHSLSSGA QEKEKLEESR DQEGLGFGYA  60
FRKNLKQTFR LSDFVGEDLA RSSKRCRECG KEFPSWKSLF GHMRCHSEKT SNSRSFEEEG  120
SWVQEKNSHE SFSKENESVP RRKCGSKQAS PASMAGCEPE EQAGAIILMM LSRDIGSCSD  180
KISEEDSGDD LKRRLILNSL VLEKKGAMVG DNGFSFSEFT FLSSRYKCLT CRKTFHSYQA  240
LGGHRASHKR IRICCRESPS FDTEASIKNL GLAYQKSRIH ECDFCGKTFL SGQALGGHKR  300
SHLVSNIGSE VGGVGTKKFV VQQFSETLGL NLQKIEQFEG FWAEASTKH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573177.11e-173zinc finger protein ZAT9-like
TrEMBLA0A2I0WYI53e-84A0A2I0WYI5_9ASPA; Zinc finger protein ZAT9
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38613573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.13e-26C2H2-like zinc finger protein