PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23740
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 152aa    MW: 17184.7 Da    PI: 9.8268
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23740genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix69.18.4e-2254117164
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 +W +qe+++Li++r e+e+++  ++++k+ We+v+ +mre+g++r+++qCk+kw+nl +ryk  
  PEQU_23740  54 QWGQQETRELIAIRAELERDFTLSRRNKTVWEAVALRMREKGYRRTSEQCKCKWKNLVNRYKGS 117
                 7************************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.73547111IPR017877Myb-like domain
SMARTSM007170.00151113IPR001005SANT/Myb domain
CDDcd122034.17E-2653117No hitNo description
PfamPF138371.1E-1853119No hitNo description
Gene3DG3DSA:1.10.10.602.8E-454112IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MGGGGEGDPL GGRMGMMPGF QLQMMPVAAE MIGTSGSAVG GGGGHRGREE KMPQWGQQET  60
RELIAIRAEL ERDFTLSRRN KTVWEAVALR MREKGYRRTS EQCKCKWKNL VNRYKGSQPQ  120
VLYTMGFNKA LGRPEDCIFF RSFYNIDFDH LL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specifically to the core DNA sequence 5'-GTTAC-3'. {ECO:0000269|PubMed:15044016}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020685442.13e-49trihelix transcription factor GT-3b
SwissprotQ9SDW05e-21TGT3A_ARATH; Trihelix transcription factor GT-3a
TrEMBLA0A2I0WIR04e-47A0A2I0WIR0_9ASPA; Trihelix transcription factor GT-3b
STRINGGSMUA_Achr7P04840_0018e-40(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP106883037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-22Trihelix family protein