PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23753
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 301aa    MW: 35069.7 Da    PI: 10.5214
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23753genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.61.7e-122085369
        FAR1  3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69
                Y++YA+++GF+vrk++    ++++ i+ ++f C k g++++ k++ ++ + +r   rtgC a+++  
  PEQU_23753 20 YCAYAHQIGFTVRKNHVGFWSNSKMIKIKDFICGKTGFKKKLKNN-VTVKYRRGDMRTGCPAMIRYV 85
                99***************************************9999.9999999**********9754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.0E-102085IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
IAESLLRIVA HNEKEAYRQY CAYAHQIGFT VRKNHVGFWS NSKMIKIKDF ICGKTGFKKK  60
LKNNVTVKYR RGDMRTGCPA MIRYVVDLKS KKKHLRSIFT DQDQTMARAI EGCLPHTRHR  120
LYQKVSWVLK MNEKDEDFKC EQSVIVPAVK SSLVLRQGSE NITNIHDKYI LLRWSVHAKR  180
DIYNSYGYKH LKDSQMSPSC SSGLIYQTHV HKFAYQISIL TQGNELAEKN VLETLKKLTI  240
ESEAILNGRD HCEMPKSKKK KTPNIQHNLN DSTKMRPKGI SNARLRGYWE KNKRVKSKHC  300
R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020595714.14e-69protein FAR1-RELATED SEQUENCE 1-like