PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_25465

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 250aa MW: 27204.2 Da PI: 8.1162

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_25465	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.7	1.2e-38	20	77	5	62
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 l+cprCdstntkfCyynnysl+qPr+fCk+C+ryWt+GG+lrnvPvGgg+rknk+s+ PEQU_25465 20 PLNCPRCDSTNTKFCYYNNYSLAQPRHFCKSCKRYWTRGGTLRNVPVGGGSRKNKRSK 77 689****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.5E-33	21	75	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-23	21	69	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.199	21	75	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	23	59	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MVAKLDHGAS SAQQNTNSPP LNCPRCDSTN TKFCYYNNYS LAQPRHFCKS CKRYWTRGGT 60 LRNVPVGGGS RKNKRSKKSS QSHRPSSSIA DTTPSLPQPP PTDLNSLLYA FPPIINSSTV 120 FFPKFDFDPQ VPEFEENFQP CHGAANLADL QKTATNFLGD YSLNSQMLAS SGPMVAETFQ 180 PLMPYDDLEI GAGNNASNKS IDWPHVVKEI NPLEATSSGA GAAAQSGYQY WNRATSSSWP 240 ESGSSVAPLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AM084365	5e-38	AM084365.1 Hordeum vulgare subsp. vulgare mRNA for dof zinc finger protein 18 (dof18 gene).

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592003.1	0.0	dof zinc finger protein DOF3.6-like
TrEMBL	A0A2I0W8Z9	1e-108	A0A2I0W8Z9_9ASPA; Dof zinc finger protein DOF5.3

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	8e-30	OBF-binding protein 3