PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_26194
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ZF-HD
Protein Properties Length: 190aa    MW: 20892.6 Da    PI: 8.5947
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_26194genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer95.93.2e-30256659
  ZF-HD_dimer  6 YkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                 ++eClkNhAa+lGgha+DGC+Efmps+ ++ +++++lkCaAC CHRnFHRr +++
   PEQU_26194  2 HRECLKNHAANLGGHALDGCCEFMPSPAATlADPTSLKCAACSCHRNFHRRVSVS 56
                 69**************************999********************8765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015661.8E-26252IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.8E-25254IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.081253IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-19252IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.601.8E-2578144IPR009057Homeodomain-like
SuperFamilySSF466893.23E-1479144IPR009057Homeodomain-like
TIGRFAMsTIGR015654.1E-2585142IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
LHRECLKNHA ANLGGHALDG CCEFMPSPAA TLADPTSLKC AACSCHRNFH RRVSVSSSEE  60
EIECFTSAPH TLLALSRNER PSATRKRFRS KFSAEQKGKM MELSERLGWR LQKRDEGLVE  120
EYCRDIGVEK GVFKVWMHNN KYQLLRVLRR GEGRSNVAGD GGGGGGRMVE GNGMSGDVDG  180
NVMNGSFSSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A1e-20841411673ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the up-regulation of several stress-inducible genes. Acts as a transcriptional activator by interacting with MED25 and NAC proteins. Involved in increased drought tolerance. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:17233795}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by abscisic acid and by drought and salt stress. Not induced by cold. {ECO:0000269|PubMed:17233795}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020594427.11e-139zinc-finger homeodomain protein 9-like
SwissprotQ9SEZ19e-51ZHD11_ARATH; Zinc-finger homeodomain protein 11
TrEMBLA0A2I0WGE31e-94A0A2I0WGE3_9ASPA; Transcription factor HB29
STRINGGSMUA_Achr6P02700_0015e-69(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92043243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.15e-51zinc finger homeodomain 1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]