PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_26225

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 129aa MW: 14823.3 Da PI: 11.2019

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_26225	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.8	4e-09	47	104	9	67
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 ++ F+v+k++s ++++ ++++fvC k g+++e +++ + r +ra trtgC+a+++ PEQU_26225 47 HIEFTVQKKHSGFWPNSKKLKTKNFVCGKAGFKKELTDT-ITVRFKRADTRTGCQAMIR 104 56799***99999****************9988.99999**********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.8E-6	49	104	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 129 aa Download sequence Send to blast
MRSIKRRMGS LGKEDRAEGV GKEILDHPRQ RNCLMQLSTT RMKHMNHIEF TVQKKHSGFW 60 PNSKKLKTKN FVCGKAGFKK ELTDTITVRF KRADTRTGCQ AMIRYFVDLD AMVGKEIHRK 120 SQPSVGGGR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020589810.1	5e-36	uncharacterized protein LOC110031106

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87