PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_26299

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bZIP

Protein Properties

Length: 426aa MW: 47506.4 Da PI: 9.3124

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_26299	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.8	5.3e-09	234	284	13	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 NR +A rs +RK +i eLe++v++L++e ++L +l l+ ++ l +++ PEQU_26299 234 NRQSAARSKERKMRYISELERRVQTLQTEATTLSTQLTLLQRDSSGLATQN 284 *************************************99998887776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-10	225	286	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.74E-9	231	276	No hit	No description
CDD	cd14703	1.30E-13	231	263	No hit	No description
Pfam	PF00170	7.7E-8	233	284	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-9	233	283	No hit	No description
PROSITE profile	PS50217	9.37	234	287	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence Send to blast
MDSIALTDLR NWSKGVRYRT LNGGKFPTVS CTQKQVGGSY YVVREIIQAL EHNHKSASLE 60 TQKGIKVWVE MAKCDDVSST REPFFLSDAK QTSFKEFEGD TTKFRMENSS NKTKEGAETS 120 SLSIEAHLDS QIKIDAIKMS TPSRVTKEDK GLDFDKLSAF TSPATVKPQT HASGMSDAEA 180 LNVGHQVSAK LESKTSVLHT STEEIEACGK DAASASNLHE EAFRSEELYQ VLANRQSAAR 240 SKERKMRYIS ELERRVQTLQ TEATTLSTQL TLLQRDSSGL ATQNNELKIR LQSMEQQAQL 300 RDGCFSSRGG NAVTLRRLVR PQNKLLVATK GSQDDSTSKG GDKNEFKMAA LNEALTTEVQ 360 RLRNKERAEL KRDRMYSFTS ICHSLGTRDV AFTFGLNPPS HAAIYNQRLL TFATNCFLLM 420 RSAGWN

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence Send to blast

MDSIALTDLR NWSKGVRYRT LNGGKFPTVS CTQKQVGGSY YVVREIIQAL EHNHKSASLE  60
TQKGIKVWVE MAKCDDVSST REPFFLSDAK QTSFKEFEGD TTKFRMENSS NKTKEGAETS  120
SLSIEAHLDS QIKIDAIKMS TPSRVTKEDK GLDFDKLSAF TSPATVKPQT HASGMSDAEA  180
LNVGHQVSAK LESKTSVLHT STEEIEACGK DAASASNLHE EAFRSEELYQ VLANRQSAAR  240
SKERKMRYIS ELERRVQTLQ TEATTLSTQL TLLQRDSSGL ATQNNELKIR LQSMEQQAQL  300
RDGCFSSRGG NAVTLRRLVR PQNKLLVATK GSQDDSTSKG GDKNEFKMAA LNEALTTEVQ  360
RLRNKERAEL KRDRMYSFTS ICHSLGTRDV AFTFGLNPPS HAAIYNQRLL TFATNCFLLM  420
RSAGWN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020586885.1	1e-149	uncharacterized protein LOC110029099

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.1	1e-20	bZIP family protein