PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_26619

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 240aa MW: 26694.6 Da PI: 6.7883

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_26619	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	4e-13	46	89	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ErrRR ++N+ ++ Lr ++Pk +K K ++L+ A++YIk+Lq PEQU_26619 46 DAERRRRTKLNQQLFSLRAMVPKI-----TKALKESTLTDAIDYIKQLQ 89 68*******************7.....699**************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.1E-14	37	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.215	39	88	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.53E-9	41	92	No hit	No description
Pfam	PF00010	1.2E-10	44	89	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-11	45	94	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.6E-13	46	104	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
MPRRPREISV ETDTIDFIDS FFEGVGDLNE FTDPATEPRF KSKNLDAERR RRTKLNQQLF 60 SLRAMVPKIT KALKESTLTD AIDYIKQLQK QVVDLQIELS SVQTEEGEKQ GSSSSTETKA 120 LQDTVRFQGM LELSPMGQNK FHLKVTSEKR INGFTKLLEA ISQLGLEVSD VSSVAFSGIS 180 HGVLLLEVSS CLLLRVDLSM KPLMMLKEKK MALSTSSCCS SSPSSSSSIH FSFFLAAEQG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020581797.1	1e-131	transcription factor UDT1-like isoform X1
TrEMBL	A0A2I0VV81	1e-109	A0A2I0VV81_9ASPA; Transcription factor ABORTED MICROSPORES
STRING	GSMUA_Achr5P09530_001	2e-59	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11982	30	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-22	bHLH family protein