PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_27354

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 340aa MW: 35815.2 Da PI: 8.4624

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_27354	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	6.9e-39	66	124	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk k PEQU_27354 66 PQQKLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKAKP 124 68999***************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.0E-32	68	123	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.255	70	124	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-26	70	121	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	72	108	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence Send to blast
MIQELLSAVV EERKLSFSAE GRLLPNEAPS PFLYSTSMST TLSPSSSAST IQLSSSSSPS 60 TASEPPQQKL RCPRCDSSNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR 120 KAKPAPIVAG GGKSSNGTKT NKSISSLDAI ARAGFGLEPE LFSPSPLLWS GPAAPPPPAP 180 HTSHLLALLR AGGAAGFRGL EPNPPLSGLN SVRIKEEAGI MEPWSQFSST VGMGSLWKNE 240 GQLPYVQLQE NNLSSSFGDV AAAGIQEVYQ RLKQQAYCND QLSIAMSNGW SSAPAAMGTS 300 IGGGGGSSNA AVDGVEVAMG GEFGYWNPAF SSWSDMSSTS

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00281	DAP	Transfer from AT2G28810	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592702.1	0.0	dof zinc finger protein DOF5.7-like
TrEMBL	A0A2I0WLN8	1e-132	A0A2I0WLN8_9ASPA; Dof zinc finger protein DOF2.2
STRING	XP_008792599.1	4e-71	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7710	31	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28810.2	4e-34	Dof family protein