PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_27468
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 97aa    MW: 11392.3 Da    PI: 11.3676
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_27468genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573674.2e-212881497
      DUF573 14 vlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                 +LqG+++f++k+g+   +++ ++  f++ +  +++f+++k+q+ eK rrLKkK+++   k+ s   ++++++ d+ ++++s+kiW 
  PEQU_27468  2 KVLQGILEFTSKRGMthaNYQRNTGPFFNEILPQLQFDFNKNQIAEKQRRLKKKYRNAAVKMGSSPGFVLKSPYDRATYKISRKIWS 88
                68************98866677***************************************8888889999***************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.2E-20288IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MKVLQGILEF TSKRGMTHAN YQRNTGPFFN EILPQLQFDF NKNQIAEKQR RLKKKYRNAA  60
VKMGSSPGFV LKSPYDRATY KISRKIWSTT FFRLGLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590480.13e-48probable transcription factor At3g04930
TrEMBLA0A2I0WQY52e-46A0A2I0WQY5_9ASPA; Mediator-associated protein 1
STRINGXP_008807916.12e-35(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.27e-24DNA-binding storekeeper protein-related transcriptional regulator