PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_28976
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 146aa    MW: 16953.8 Da    PI: 11.2014
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_28976genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.45.7e-064260321
                ETTTTEEESSHHHHHHHHH CS
     zf-C2H2  3 CpdCgksFsrksnLkrHir 21
                C+ Cgk+Fs++  L  H+r
  PEQU_28976 42 CTECGKRFSSWKALFGHMR 60
                ******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.00594062IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.9934067IPR007087Zinc finger, C2H2
SuperFamilySSF576678.96E-64165No hitNo description
PfamPF139127.4E-94264IPR007087Zinc finger, C2H2
PROSITE patternPS0002804262IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.1E-54262IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048235Biological Processpollen sperm cell differentiation
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MVLTTTIYPP TSHHLPPRPP LHLKPCAERK PNPNQPQCTP ACTECGKRFS SWKALFGHMR  60
CHPERNWRGI KPPTQVRRAH FTEDEFQVAA ILLLLANGPP AASEPLSYGF CLNHLSWMPR  120
HGRVRKKRKR KMVDQQFWRR LFGLNT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129RKKRKR
2124130RKKRKRK
3124131RKKRKRKM
4125130KKRKRK
Functional Description ? help Back to Top
Source Description
UniProtMediates the regulation of male germ cell division by DUO1. {ECO:0000269|PubMed:24876252}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Activated by the transcription factor DUO1. {ECO:0000269|PubMed:21285328}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574146.11e-30uncharacterized protein LOC110020399
SwissprotO654995e-22ZAT3_ARATH; Zinc finger protein ZAT3
TrEMBLA0A2I0W0Q81e-42A0A2I0W0Q8_9ASPA; Zinc finger protein ZAT3
STRINGGorai.005G259000.11e-23(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116122130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.11e-24C2H2-like zinc finger protein