PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_29271

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 130aa MW: 15105.1 Da PI: 10.2244

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_29271	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.9	9.5e-20	19	102	5	90
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YA++vGFsvrk++s++ ++++i++++f C k g++e++ ++ + + +++ tr+gC+a+++ + +g+w v+k+ + Hn +la PEQU_29271 19 VYAHHVGFSVRKDHSSYWPNSKKIKTKDFICGKAGQKESNPTD--TVKFRKTDTRIGCQAMIRYAIDVKGNWTVKKFIESHNNPLA 102 6************************************9988..77778889***************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.4E-17	19	102	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MFLRTVVHIE QEAYESNRVY AHHVGFSVRK DHSSYWPNSK KIKTKDFICG KAGQKESNPT 60 DTVKFRKTDT RIGCQAMIRY AIDVKGNWTV KKFIESHNNP LAESGDNHFL HSSRKINELN 120 TDFLRSMTRS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592994.1	1e-61	uncharacterized protein LOC110033378
TrEMBL	A0A2I0VPA5	8e-33	A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A2I0VS86	3e-34	A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-10	FAR1 family protein