PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_29587
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 147aa    MW: 15980.7 Da    PI: 7.0828
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_29587genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.9e-081232447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia +++ gRt++++k++w+++
       PEQU_29587  1 WSLIAGRLP-GRTDNEIKNYWNTH 23
                     *********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001677.60E-7124No hitNo description
SuperFamilySSF466893.75E-7137IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-12138IPR009057Homeodomain-like
PfamPF002493.9E-6123IPR001005SANT/Myb domain
PROSITE profilePS5129417.06128IPR017930Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
WSLIAGRLPG RTDNEIKNYW NTHIKRKLRS RGIDPQTHHP FTAAAAASLN SPEICSAVPE  60
TADTSDHKCH SDSSSGGGGR NYVDLNLDLS IGLPYHSSPY SDDASTAAAV RSPEICFCFR  120
LGFRGGEGCS CESLKEQFVS RLAMSNY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7694701e-153KF769470.1 Phalaenopsis equestris MYB transcription factor 5 (MYB5) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020696157.12e-82myb-related protein 308-like
TrEMBLA0A2I0WXK35e-81A0A2I0WXK3_9ASPA; Myb-related protein 308
STRINGXP_008783376.15e-33(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34990.12e-25myb domain protein 32