PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_29721
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 69aa    MW: 7946.14 Da    PI: 7.5123
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_29721genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67e-161613799
                EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                tl+d+sgrsW v +++r   gr+ l++GW  F+k+n++ke+D+++F+l+g   +e+ v+++r+
  PEQU_29721  1 TLRDPSGRSWLVDIKHRVD-GRVHLGQGWFLFCKENHIKEKDICIFELTG-GIQEMDVQICRR 61
                699***********76666.5677999*********************99.77778*****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100177.67E-13160No hitNo description
Gene3DG3DSA:2.40.330.101.8E-15160IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.281162IPR003340B3 DNA binding domain
SuperFamilySSF1019366.87E-15161IPR015300DNA-binding pseudobarrel domain
PfamPF023621.4E-13161IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
TLRDPSGRSW LVDIKHRVDG RVHLGQGWFL FCKENHIKEK DICIFELTGG IQEMDVQICR  60
RGLHDIATG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020593867.18e-43B3 domain-containing protein Os11g0197600-like
TrEMBLA0A2I0VT998e-24A0A2I0VT99_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3747333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.14e-09B3 family protein