PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_29726
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 124aa    MW: 14128.2 Da    PI: 5.8035
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_29726genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.79e-132741997
                -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3 19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                p  f ++ +g+    ++ +l+++ gr+W v l  r+ +++ ++++GW  Fv +  ++ g+f++F +dg+ +f   vkv+
  PEQU_29726  2 PPCFYKHLSGD--ILVKSVLRSRGGRRWAVML--RREGNSLFFGEGWDCFVADLSVQLGEFLLFVYDGDLGF--DVKVY 74
                56666444555..567789*************..*********************************99888..55554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.0E-13179IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.211177IPR003340B3 DNA binding domain
SuperFamilySSF1019361.96E-15179IPR015300DNA-binding pseudobarrel domain
CDDcd100171.22E-10174No hitNo description
PfamPF023621.6E-9172IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
IPPCFYKHLS GDILVKSVLR SRGGRRWAVM LRREGNSLFF GEGWDCFVAD LSVQLGEFLL  60
FVYDGDLGFD VKVYGTTGCE KEDPIAAVKV EHEVEEREIR GELRAETSTT LIRAPIRRRE  120
CISF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020593867.11e-80B3 domain-containing protein Os11g0197600-like
TrEMBLA0A2I0VT991e-55A0A2I0VT99_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127923135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.15e-16B3 family protein